STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW87916.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (290 aa)    
Predicted Functional Partners:
SDW87947.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.995
SDW87887.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.992
SDW87859.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.991
SDW88008.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.989
SDW87726.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 0.986
SDW87982.1
Predicted small integral membrane protein.
 
    0.932
SDW87762.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  
 
0.931
SDW78507.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
 
 0.716
SDW47776.1
Sorbitol ABC transporter membrane protein.
 
 
 0.701
UgpC
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 
 0.690
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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