STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW72942.1Hypothetical protein. (128 aa)    
Predicted Functional Partners:
SDW73023.1
Thioredoxin-related protein.
 
     0.933
SoxX
Monoheme cytochrome SoxX (sulfur oxidation).
 
   
 0.887
SoxY
Sulfur-oxidizing protein SoxY.
 
   
 0.869
SoxZ
Sulfur compound chelating protein SoxZ.
 
   
 0.863
SoxA
Diheme cytochrome SoxA (sulfur oxidation).
 
     0.852
SoxB
Sulfate thiol esterase SoxB; Belongs to the 5'-nucleotidase family.
 
   
 0.825
SDW73282.1
Sulfur dehydrogenase subunit SoxD.
 
     0.813
SDW72909.1
Transcriptional regulator, ArsR family.
 
     0.811
SoxC
Sulfur dehydrogenase subunit SoxC.
 
     0.806
SDW03459.1
Sulphur transport.
 
     0.803
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.