STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDW95679.1Hypothetical protein. (348 aa)    
Predicted Functional Partners:
TcuA
Tricarballylate dehydrogenase.
 
     0.828
TcuB
Citrate/tricarballylate utilization protein.
 
     0.814
SDW95454.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.791
SDW95483.1
TctA family transporter.
 
    0.781
SDW95520.1
Hypothetical protein.
 
     0.701
SDW95720.1
Transcriptional regulator, GntR family.
 
     0.697
SDW95381.1
Two-component system, OmpR family, sensor histidine kinase TctE.
 
     0.696
SDW95642.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.631
SDX45181.1
Tripartite tricarboxylate transporter TctB family protein.
  
    0.413
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.