STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX01066.1Conserved hypothetical protein. (256 aa)    
Predicted Functional Partners:
SDX01024.1
Hypothetical protein.
 
     0.968
SDX00713.1
Nucleotide-binding universal stress protein, UspA family.
 
     0.847
SDX00947.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
       0.739
SDX00870.1
Nucleoside-binding protein.
       0.738
SDX00987.1
Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
       0.581
SDX00907.1
Nucleoside ABC transporter ATP-binding protein.
       0.579
TsaB
tRNA threonylcarbamoyl adenosine modification protein YeaZ.
 
     0.548
SDX00833.1
Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.
       0.495
SDX00753.1
Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domain.
       0.464
tatA
Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.
  
     0.453
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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