Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDX01350.1 | SDX01396.1 | SAMN04488041_104162 | SAMN04488041_104163 | Hypothetical protein. | Hypothetical protein. | 0.681 |
SDX01350.1 | SDX01433.1 | SAMN04488041_104162 | SAMN04488041_104164 | Hypothetical protein. | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.568 |
SDX01350.1 | SDX01513.1 | SAMN04488041_104162 | SAMN04488041_104166 | Hypothetical protein. | Hypothetical protein. | 0.408 |
SDX01350.1 | SDX01557.1 | SAMN04488041_104162 | SAMN04488041_104167 | Hypothetical protein. | Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.421 |
SDX01350.1 | SDX24586.1 | SAMN04488041_104162 | SAMN04488041_105209 | Hypothetical protein. | Putative spermidine/putrescine transport system substrate-binding protein. | 0.568 |
SDX01350.1 | SDX24620.1 | SAMN04488041_104162 | SAMN04488041_105210 | Hypothetical protein. | Putative spermidine/putrescine transport system permease protein. | 0.436 |
SDX01350.1 | lepA | SAMN04488041_104162 | SAMN04488041_10353 | Hypothetical protein. | GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner. | 0.670 |
SDX01350.1 | potA-2 | SAMN04488041_104162 | SAMN04488041_105208 | Hypothetical protein. | Putative spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. | 0.452 |
SDX01396.1 | SDX01350.1 | SAMN04488041_104163 | SAMN04488041_104162 | Hypothetical protein. | Hypothetical protein. | 0.681 |
SDX01396.1 | SDX01433.1 | SAMN04488041_104163 | SAMN04488041_104164 | Hypothetical protein. | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.661 |
SDX01396.1 | SDX01513.1 | SAMN04488041_104163 | SAMN04488041_104166 | Hypothetical protein. | Hypothetical protein. | 0.495 |
SDX01433.1 | SDX01350.1 | SAMN04488041_104164 | SAMN04488041_104162 | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Hypothetical protein. | 0.568 |
SDX01433.1 | SDX01396.1 | SAMN04488041_104164 | SAMN04488041_104163 | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Hypothetical protein. | 0.661 |
SDX01433.1 | SDX01513.1 | SAMN04488041_104164 | SAMN04488041_104166 | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Hypothetical protein. | 0.772 |
SDX01433.1 | SDX01557.1 | SAMN04488041_104164 | SAMN04488041_104167 | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.999 |
SDX01513.1 | SDX01350.1 | SAMN04488041_104166 | SAMN04488041_104162 | Hypothetical protein. | Hypothetical protein. | 0.408 |
SDX01513.1 | SDX01396.1 | SAMN04488041_104166 | SAMN04488041_104163 | Hypothetical protein. | Hypothetical protein. | 0.495 |
SDX01513.1 | SDX01433.1 | SAMN04488041_104166 | SAMN04488041_104164 | Hypothetical protein. | Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.772 |
SDX01513.1 | SDX01557.1 | SAMN04488041_104166 | SAMN04488041_104167 | Hypothetical protein. | Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | 0.755 |
SDX01557.1 | SDX01350.1 | SAMN04488041_104167 | SAMN04488041_104162 | Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. | Hypothetical protein. | 0.421 |
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