STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX01870.1L-erythro-3-methylmalyl-CoA dehydratase. (345 aa)    
Predicted Functional Partners:
SDX49851.1
(2S)-methylsuccinyl-CoA dehydrogenase.
 
 0.982
SDX07195.1
beta-methylmalyl-CoA/L-malyl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.978
SDX01770.1
(3S)-malyl-CoA thioesterase; Belongs to the HpcH/HpaI aldolase family.
 
  
 0.914
CcrA
crotonyl-CoA carboxylase/reductase.
 
 
 0.888
SDX01839.1
Hypothetical protein.
       0.867
SDX01229.1
(R)-ethylmalonyl-CoA mutase.
 
  
 0.860
SDX01804.1
NnrU protein.
 
    0.857
SDW86795.1
Catalase.
   
 0.660
glcB
Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.
   
  
 0.554
SDW17995.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.494
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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