STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX03476.1Tellurite resistance protein. (140 aa)    
Predicted Functional Partners:
lysS
lysyl-tRNA synthetase, class I; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.729
SDW09544.1
Heat shock protein Hsp15.
  
     0.680
SDX24973.1
Invasion protein IalB, involved in pathogenesis.
  
     0.648
SDW99573.1
Hypothetical protein.
  
     0.598
SDX03408.1
Protein of unknown function.
       0.552
SDW83457.1
DnaJ like chaperone protein.
  
     0.509
SDW84387.1
DNA-binding transcriptional regulator, MarR family.
  
     0.480
SDW59753.1
Nucleoid-associated protein YgaU, contains BON and LysM domains.
  
     0.422
SDW45035.1
Penicillin amidase.
  
     0.412
SDX00713.1
Nucleotide-binding universal stress protein, UspA family.
  
     0.410
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.