Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HydA | PreA | SAMN04488041_104236 | SAMN04488041_104239 | Dihydropyrimidinase. | Dihydrouracil dehydrogenase (NAD+). | 0.994 |
HydA | SDX03983.1 | SAMN04488041_104236 | SAMN04488041_104237 | Dihydropyrimidinase. | N-carbamoyl-L-amino-acid hydrolase. | 0.991 |
HydA | SDX04015.1 | SAMN04488041_104236 | SAMN04488041_104238 | Dihydropyrimidinase. | Transcriptional regulator, TetR family. | 0.661 |
HydA | SDX04109.1 | SAMN04488041_104236 | SAMN04488041_104240 | Dihydropyrimidinase. | Glutamate synthase (NADPH/NADH) small chain. | 0.977 |
HydA | SDX19193.1 | SAMN04488041_104236 | SAMN04488041_10524 | Dihydropyrimidinase. | N-carbamoyl-L-amino-acid hydrolase. | 0.968 |
HydA | SDX73912.1 | SAMN04488041_104236 | SAMN04488041_11610 | Dihydropyrimidinase. | N-carbamoyl-L-amino-acid hydrolase. | 0.974 |
PreA | HydA | SAMN04488041_104239 | SAMN04488041_104236 | Dihydrouracil dehydrogenase (NAD+). | Dihydropyrimidinase. | 0.994 |
PreA | SDX03983.1 | SAMN04488041_104239 | SAMN04488041_104237 | Dihydrouracil dehydrogenase (NAD+). | N-carbamoyl-L-amino-acid hydrolase. | 0.943 |
PreA | SDX04015.1 | SAMN04488041_104239 | SAMN04488041_104238 | Dihydrouracil dehydrogenase (NAD+). | Transcriptional regulator, TetR family. | 0.400 |
PreA | SDX04109.1 | SAMN04488041_104239 | SAMN04488041_104240 | Dihydrouracil dehydrogenase (NAD+). | Glutamate synthase (NADPH/NADH) small chain. | 0.999 |
PreA | SDX19193.1 | SAMN04488041_104239 | SAMN04488041_10524 | Dihydrouracil dehydrogenase (NAD+). | N-carbamoyl-L-amino-acid hydrolase. | 0.902 |
PreA | SDX73912.1 | SAMN04488041_104239 | SAMN04488041_11610 | Dihydrouracil dehydrogenase (NAD+). | N-carbamoyl-L-amino-acid hydrolase. | 0.909 |
SDW80995.1 | SDX03983.1 | SAMN04488041_103294 | SAMN04488041_104237 | malonyl-CoA/methylmalonyl-CoA synthetase. | N-carbamoyl-L-amino-acid hydrolase. | 0.803 |
SDW80995.1 | SDX19193.1 | SAMN04488041_103294 | SAMN04488041_10524 | malonyl-CoA/methylmalonyl-CoA synthetase. | N-carbamoyl-L-amino-acid hydrolase. | 0.803 |
SDW80995.1 | SDX19759.1 | SAMN04488041_103294 | SAMN04488041_10543 | malonyl-CoA/methylmalonyl-CoA synthetase. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.910 |
SDW80995.1 | SDX20997.1 | SAMN04488041_103294 | SAMN04488041_10583 | malonyl-CoA/methylmalonyl-CoA synthetase. | Aldehyde dehydrogenase (NAD+). | 0.910 |
SDW80995.1 | SDX38896.1 | SAMN04488041_103294 | SAMN04488041_106114 | malonyl-CoA/methylmalonyl-CoA synthetase. | Aldehyde dehydrogenase (acceptor). | 0.910 |
SDW80995.1 | SDX73912.1 | SAMN04488041_103294 | SAMN04488041_11610 | malonyl-CoA/methylmalonyl-CoA synthetase. | N-carbamoyl-L-amino-acid hydrolase. | 0.803 |
SDX03983.1 | HydA | SAMN04488041_104237 | SAMN04488041_104236 | N-carbamoyl-L-amino-acid hydrolase. | Dihydropyrimidinase. | 0.991 |
SDX03983.1 | PreA | SAMN04488041_104237 | SAMN04488041_104239 | N-carbamoyl-L-amino-acid hydrolase. | Dihydrouracil dehydrogenase (NAD+). | 0.943 |
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