STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX06081.1Predicted secreted protein. (97 aa)    
Predicted Functional Partners:
Mce
methylmalonyl-CoA epimerase /ethylmalonyl-CoA epimerase.
       0.867
SDW05549.1
Hypothetical protein.
  
     0.601
SDX24809.1
Hypothetical protein.
  
     0.574
SDX49938.1
Hypothetical protein.
  
     0.564
SDW05848.1
Uncharacterized membrane protein.
  
     0.554
SDX06140.1
Response regulator receiver domain-containing protein.
       0.542
SDW60194.1
Hypothetical protein.
  
     0.483
SDW06571.1
Hypothetical protein.
  
     0.474
SDW58241.1
Hypothetical protein.
  
     0.452
SDX27503.1
HemY protein.
 
     0.450
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.