STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX07577.1TRAP-type mannitol/chloroaromatic compound transport system, small permease component. (188 aa)    
Predicted Functional Partners:
SDX07609.1
TRAP transporter, DctM subunit.
 
    0.944
SDX07552.1
TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein.
 
    0.889
SDW48719.1
Tat (twin-arginine translocation) pathway signal sequence; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
    0.742
SDX47084.1
TRAP transporter, DctM subunit.
 
    0.734
SDX47114.1
TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
    0.732
SDX71274.1
Tripartite ATP-independent transporter, DctM component.
 
    0.731
SDW23770.1
TRAP transporter, DctM subunit.
 
    0.694
SDX56675.1
TRAP transporter, DctM subunit.
 
    0.682
SDX47051.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
  
     0.681
SDW79434.1
Tat (twin-arginine translocation) pathway signal sequence; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
    0.674
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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