Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| NirD | SDX10450.1 | SAMN04488041_104443 | SAMN04488041_104441 | Assimilatory nitrite reductase (NAD(P)H) small subunit. | Anthranilate phosphoribosyltransferase. | 0.896 |
| NirD | SDX10482.1 | SAMN04488041_104443 | SAMN04488041_104442 | Assimilatory nitrite reductase (NAD(P)H) small subunit. | Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.998 |
| NirD | SDX10584.1 | SAMN04488041_104443 | SAMN04488041_104445 | Assimilatory nitrite reductase (NAD(P)H) small subunit. | Nitrate/nitrite transport system ATP-binding protein. | 0.909 |
| NirD | SDX10639.1 | SAMN04488041_104443 | SAMN04488041_104446 | Assimilatory nitrite reductase (NAD(P)H) small subunit. | Nitrate/nitrite transport system permease protein. | 0.935 |
| SDW00271.1 | SDX10450.1 | SAMN04488041_10115 | SAMN04488041_104441 | Anthranilate synthase, component II. | Anthranilate phosphoribosyltransferase. | 0.880 |
| SDW00271.1 | trpA | SAMN04488041_10115 | SAMN04488041_104129 | Anthranilate synthase, component II. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.975 |
| SDW00271.1 | trpB | SAMN04488041_10115 | SAMN04488041_104137 | Anthranilate synthase, component II. | Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.973 |
| SDW00271.1 | trpC | SAMN04488041_10115 | SAMN04488041_10118 | Anthranilate synthase, component II. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.999 |
| SDW00271.1 | trpE | SAMN04488041_10115 | SAMN04488041_10112 | Anthranilate synthase, component II. | Anthranilate synthase, component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concent [...] | 0.999 |
| SDW00271.1 | trpF | SAMN04488041_10115 | SAMN04488041_101439 | Anthranilate synthase, component II. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.981 |
| SDX10450.1 | NirD | SAMN04488041_104441 | SAMN04488041_104443 | Anthranilate phosphoribosyltransferase. | Assimilatory nitrite reductase (NAD(P)H) small subunit. | 0.896 |
| SDX10450.1 | SDW00271.1 | SAMN04488041_104441 | SAMN04488041_10115 | Anthranilate phosphoribosyltransferase. | Anthranilate synthase, component II. | 0.880 |
| SDX10450.1 | SDX10482.1 | SAMN04488041_104441 | SAMN04488041_104442 | Anthranilate phosphoribosyltransferase. | Assimilatory nitrate reductase (NADH) alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.882 |
| SDX10450.1 | SDX10584.1 | SAMN04488041_104441 | SAMN04488041_104445 | Anthranilate phosphoribosyltransferase. | Nitrate/nitrite transport system ATP-binding protein. | 0.890 |
| SDX10450.1 | SDX10639.1 | SAMN04488041_104441 | SAMN04488041_104446 | Anthranilate phosphoribosyltransferase. | Nitrate/nitrite transport system permease protein. | 0.923 |
| SDX10450.1 | trpA | SAMN04488041_104441 | SAMN04488041_104129 | Anthranilate phosphoribosyltransferase. | Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.898 |
| SDX10450.1 | trpB | SAMN04488041_104441 | SAMN04488041_104137 | Anthranilate phosphoribosyltransferase. | Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.891 |
| SDX10450.1 | trpC | SAMN04488041_104441 | SAMN04488041_10118 | Anthranilate phosphoribosyltransferase. | Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. | 0.892 |
| SDX10450.1 | trpE | SAMN04488041_104441 | SAMN04488041_10112 | Anthranilate phosphoribosyltransferase. | Anthranilate synthase, component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concent [...] | 0.975 |
| SDX10450.1 | trpF | SAMN04488041_104441 | SAMN04488041_101439 | Anthranilate phosphoribosyltransferase. | Phosphoribosylanthranilate isomerase; Belongs to the TrpF family. | 0.886 |
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