STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX10913.1D-amino-acid dehydrogenase. (414 aa)    
Predicted Functional Partners:
SDW59968.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 
 0.883
SDX10946.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
     0.788
SDX10973.1
TRAP-type C4-dicarboxylate transport system, small permease component.
 
     0.717
SDX11008.1
TRAP transporter, DctM subunit.
 
  
  0.657
SDX11038.1
Sensor histidine kinase inhibitor, KipI family.
  
    0.493
SDX11072.1
Allophanate hydrolase.
       0.483
SDX11104.1
UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.478
SDX10847.1
Transcriptional regulator, LacI family.
     
 0.471
SDX10883.1
Hypothetical protein.
       0.465
SDX11387.1
Negative transcriptional regulator, PaiB family.
  
    0.435
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.