STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX12307.1Lysophospholipase L1. (237 aa)    
Predicted Functional Partners:
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
     
 0.696
SDW54118.1
Hypothetical protein.
  
 
 0.667
SDX20211.1
Hemolysin-type calcium-binding repeat-containing protein.
  
 
 0.667
GltB
Glutamate synthase (NADPH) large subunit.
       0.538
SDX12241.1
Glutathione S-transferase.
       0.534
QueG
Epoxyqueuosine reductase.
       0.515
SDX47140.1
Chromosome partitioning protein, ParB family.
 
    0.465
SDX10057.1
Protein of unknown function.
  
     0.436
SDX12384.1
Glutamate synthase (NADPH) small subunit.
       0.422
SDX12170.1
N-methylhydantoinase A/oxoprolinase/acetone carboxylase, beta subunit.
       0.412
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.