Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| MepA | SDW98155.1 | SAMN04488041_105190 | SAMN04488041_10473 | Penicillin-insensitive murein endopeptidase. | L,D-transpeptidase catalytic domain. | 0.488 |
| SDW47444.1 | SDW98155.1 | SAMN04488041_102293 | SAMN04488041_10473 | Hypothetical protein. | L,D-transpeptidase catalytic domain. | 0.407 |
| SDW47444.1 | SDX30040.1 | SAMN04488041_102293 | SAMN04488041_105378 | Hypothetical protein. | Cysteine-rich secretory protein family protein. | 0.535 |
| SDW98155.1 | MepA | SAMN04488041_10473 | SAMN04488041_105190 | L,D-transpeptidase catalytic domain. | Penicillin-insensitive murein endopeptidase. | 0.488 |
| SDW98155.1 | SDW47444.1 | SAMN04488041_10473 | SAMN04488041_102293 | L,D-transpeptidase catalytic domain. | Hypothetical protein. | 0.407 |
| SDW98155.1 | SDW98184.1 | SAMN04488041_10473 | SAMN04488041_10474 | L,D-transpeptidase catalytic domain. | 3-oxoacid CoA-transferase subunit A. | 0.442 |
| SDW98155.1 | SDW98215.1 | SAMN04488041_10473 | SAMN04488041_10475 | L,D-transpeptidase catalytic domain. | 3-oxoacid CoA-transferase subunit B. | 0.442 |
| SDW98155.1 | SDX30023.1 | SAMN04488041_10473 | SAMN04488041_105377 | L,D-transpeptidase catalytic domain. | L,D-transpeptidase catalytic domain. | 0.695 |
| SDW98155.1 | SDX30040.1 | SAMN04488041_10473 | SAMN04488041_105378 | L,D-transpeptidase catalytic domain. | Cysteine-rich secretory protein family protein. | 0.437 |
| SDW98155.1 | SDX71961.1 | SAMN04488041_10473 | SAMN04488041_11426 | L,D-transpeptidase catalytic domain. | L,D-transpeptidase catalytic domain. | 0.678 |
| SDW98155.1 | topA | SAMN04488041_10473 | SAMN04488041_10472 | L,D-transpeptidase catalytic domain. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.542 |
| SDW98184.1 | SDW98155.1 | SAMN04488041_10474 | SAMN04488041_10473 | 3-oxoacid CoA-transferase subunit A. | L,D-transpeptidase catalytic domain. | 0.442 |
| SDW98184.1 | SDW98215.1 | SAMN04488041_10474 | SAMN04488041_10475 | 3-oxoacid CoA-transferase subunit A. | 3-oxoacid CoA-transferase subunit B. | 0.999 |
| SDW98184.1 | topA | SAMN04488041_10474 | SAMN04488041_10472 | 3-oxoacid CoA-transferase subunit A. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.613 |
| SDW98215.1 | SDW98155.1 | SAMN04488041_10475 | SAMN04488041_10473 | 3-oxoacid CoA-transferase subunit B. | L,D-transpeptidase catalytic domain. | 0.442 |
| SDW98215.1 | SDW98184.1 | SAMN04488041_10475 | SAMN04488041_10474 | 3-oxoacid CoA-transferase subunit B. | 3-oxoacid CoA-transferase subunit A. | 0.999 |
| SDW98215.1 | topA | SAMN04488041_10475 | SAMN04488041_10472 | 3-oxoacid CoA-transferase subunit B. | DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...] | 0.612 |
| SDX30023.1 | SDW98155.1 | SAMN04488041_105377 | SAMN04488041_10473 | L,D-transpeptidase catalytic domain. | L,D-transpeptidase catalytic domain. | 0.695 |
| SDX30040.1 | SDW47444.1 | SAMN04488041_105378 | SAMN04488041_102293 | Cysteine-rich secretory protein family protein. | Hypothetical protein. | 0.535 |
| SDX30040.1 | SDW98155.1 | SAMN04488041_105378 | SAMN04488041_10473 | Cysteine-rich secretory protein family protein. | L,D-transpeptidase catalytic domain. | 0.437 |
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