STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX18824.1iron(III) transport system substrate-binding protein. (338 aa)    
Predicted Functional Partners:
SDX18851.1
iron(III) transport system permease protein.
 
 
 0.984
SDW01541.1
iron(III) transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 0.950
SDW43617.1
iron(III) transport system permease protein.
 
 
 0.945
SDW43656.1
iron(III) transport system substrate-binding protein.
     
0.906
SDX36967.1
Putative iron-regulated protein.
  
    0.865
SDW43579.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 
 0.841
SDX11794.1
Thiamine transport system permease protein.
  
  
 0.603
SDX28709.1
Major Facilitator Superfamily protein.
  
  
 0.591
TrxB
Thioredoxin reductase (NADPH).
   
  
 0.574
SDW86795.1
Catalase.
   
 
 0.495
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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