STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX22510.12-dehydro-3-deoxygluconokinase. (301 aa)    
Predicted Functional Partners:
Eda
2-keto-3-deoxy-phosphogluconate aldolase.
 
 0.953
SDX40119.1
2-keto-3-deoxygluconate kinase.
  
  
 
0.918
edd
6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.
    
 0.906
uxuA
D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.887
SDW72664.1
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.851
SDX22486.1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
  
 0.789
SDX22430.1
Tripartite ATP-independent transporter, DctQ component.
       0.765
SDX22455.1
TRAP transporter, DctM subunit.
       0.757
SDX22380.1
Transcriptional regulator, LacI family.
 
  
 0.717
SDW78677.1
2-keto-3-deoxy-phosphogalactonate aldolase.
 
  
 0.599
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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