STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MepAPenicillin-insensitive murein endopeptidase. (311 aa)    
Predicted Functional Partners:
SDX23965.1
MFS transporter, UMF1 family.
       0.867
SDX24030.1
Hypothetical protein.
       0.867
SDX24063.1
Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.
       0.728
SDW41661.1
Uncharacterized conserved protein YcbK, DUF882 family.
  
     0.669
SDX23904.1
YggT family protein.
       0.622
SDW97348.1
Hypothetical protein.
  
     0.613
SDX59897.1
L,D-transpeptidase catalytic domain.
  
     0.586
SDX59867.1
Lipoprotein-anchoring transpeptidase ErfK/SrfK.
  
     0.581
SDX30062.1
L,D-transpeptidase catalytic domain.
  
     0.578
SDX23931.1
Sensors of blue-light using FAD.
       0.497
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.