STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX28272.1Two-component system, response regulator RegA. (184 aa)    
Predicted Functional Partners:
SDX28338.1
Two-component system, sensor histidine kinase RegB.
 
 0.995
SDX28305.1
Protein SCO1/2.
  
  
 0.664
SDW24071.1
Hypothetical protein.
 
 
 0.654
SDW71375.1
Protein of unknown function.
  
     0.572
SDX21572.1
Two component transcriptional regulator, winged helix family.
  
 
 0.506
SDX28442.1
Hypothetical protein.
 
     0.472
SDW46576.1
Protein of unknown function.
  
     0.468
SDX28376.1
PAS domain-containing protein.
     
 0.451
SDW37803.1
dCTP deaminase.
  
     0.433
SDX22756.1
Protein of unknown function.
  
     0.410
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.