STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX39209.1Chromosome partitioning protein, ParB family. (381 aa)    
Predicted Functional Partners:
SDX39242.1
Cellulose biosynthesis protein BcsQ.
 
 0.970
SDX47171.1
Cellulose biosynthesis protein BcsQ.
 
 0.873
SDX39308.1
Hypothetical protein.
 
     0.858
SDX47199.1
DnaA N-terminal domain-containing protein.
  
     0.774
SDX66019.1
Chromosome partitioning protein.
 
 0.687
SDX58661.1
Chromosome partitioning protein.
 
 0.621
SDX39146.1
Toxin CcdB.
 
     0.538
SDX39177.1
Antitoxin CcdA.
 
     0.535
rsmG
16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.494
SDX65955.1
Replication initiation protein RepC.
 
   
 0.489
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.