STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX35909.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG. (263 aa)    
Predicted Functional Partners:
SDX35877.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
 
0.840
SDX35800.1
acyl-CoA dehydrogenase.
 
  
 0.825
SDX35942.1
Glyoxalase-like domain-containing protein.
       0.777
SDX35742.1
3-hydroxyacyl-CoA dehydrogenase.
  
  
 0.735
SDX35710.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
 
   
 0.697
SDX35772.1
crotonobetainyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  
 0.691
SDX67707.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
 
 0.658
SDX64127.1
Enoyl-(Acyl carrier protein) reductase.
 
 
 0.589
SDX51672.1
7-alpha-hydroxysteroid dehydrogenase.
 
 
 0.574
SDX21049.1
SnoaL-like domain-containing protein.
 
  
 0.564
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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