STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX36073.1CubicO group peptidase, beta-lactamase class C family. (400 aa)    
Predicted Functional Partners:
SDX35973.1
Predicted metal-dependent hydrolase, TIM-barrel fold.
 
     0.860
SDX36007.1
acyl-CoA thioesterase-2.
       0.781
SDX36041.1
acetoacetyl-CoA synthetase.
       0.781
SDX36178.1
Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
     0.591
SDX36112.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
       0.526
SDX36141.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
       0.526
SDX36211.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
       0.526
SDX36245.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
     0.483
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.