STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX36675.1Isoquinoline 1-oxidoreductase, beta subunit. (725 aa)    
Predicted Functional Partners:
SDX36707.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 
 0.972
SDX36644.1
Hypothetical protein.
 
    0.894
SDW96668.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 
 0.878
SDW51199.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 
 0.876
SDW80893.1
Isoquinoline 1-oxidoreductase, alpha subunit.
 
 0.874
SDW80958.1
Hypothetical protein.
 
    0.487
SDX36736.1
Multidrug efflux pump.
       0.468
SDW74376.1
Xanthine dehydrogenase YagT iron-sulfur-binding subunit.
 
 
 0.458
SDX36763.1
Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
       0.436
SDW53761.1
Carbon-monoxide dehydrogenase small subunit.
 
 
 0.424
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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