STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX36842.1Aldose 1-epimerase. (338 aa)    
Predicted Functional Partners:
SDW78754.1
Beta-galactosidase.
 
 
 0.939
SDW78545.1
Alpha-galactosidase.
 
 
  0.936
SDW78617.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
   
 
 0.904
xylA
D-xylose isomerase; Belongs to the xylose isomerase family.
 
  
 0.706
SDW78721.1
Sugar lactone lactonase YvrE.
 
   
 0.641
xylB
Xylulokinase.
 
  
 0.629
SDW78677.1
2-keto-3-deoxy-phosphogalactonate aldolase.
 
   
 0.569
SDX36794.1
MFS transporter, DHA1 family, bicyclomycin/chloramphenicol resistance protein.
     
 0.531
SDX36873.1
Response regulator receiver domain-containing protein.
     
 0.524
SDX27875.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
 
  
 0.519
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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