STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX38023.1Transglycosylase SLT domain-containing protein. (262 aa)    
Predicted Functional Partners:
SDX37951.1
Flagellar biosynthetic protein FliR.
 
    0.917
SDX38171.1
Flagella basal body rod protein.
 
  
 0.903
fliE
Flagellar hook-basal body complex protein FliE.
 
  
 0.895
flhA
Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
    0.886
SDX37916.1
Flagellar biosynthetic protein FlhB.
  
  
 0.876
FliQ
Flagellar biosynthetic protein FliQ.
 
    0.856
FlgC
Flagellar basal-body rod protein FlgC.
 
  
 0.822
SDX38413.1
Flagellar hook-associated protein 3 FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
 
 
 0.732
SDX38211.1
Flagellum-specific ATP synthase.
  
  
 0.725
SDX37556.1
Protein of unknown function.
 
 
 0.695
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.