STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX46842.1Amino acid/polyamine/organocation transporter, APC superfamily. (466 aa)    
Predicted Functional Partners:
SDW86239.1
Sucrose phosphorylase.
 
 0.954
SDX46939.1
Hypothetical protein.
 
     0.792
SDX46964.1
Putative membrane protein.
 
     0.792
CoxB-2
Cytochrome c oxidase subunit 2.
  
   0.764
CtaD-2
Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family.
     
 0.759
SDX46993.1
Cytochrome c553.
       0.727
SDX47023.1
PhoP regulatory network protein YrbL.
    
 0.682
SDX46794.1
Membrane protein DedA, SNARE-associated domain.
 
     0.655
SDW58940.1
Sodium/proton antiporter, CPA1 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.
   
 
 0.547
SDW59968.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
  
 0.511
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.