STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX50554.1Cystathione beta-lyase. (389 aa)    
Predicted Functional Partners:
SDW06857.1
O-succinylhomoserine sulfhydrylase.
 
 0.945
SDW07977.1
Cystathionine gamma-synthase.
 
 
 0.942
SDW09232.1
O-acetylhomoserine sulfhydrylase.
   
 0.927
SDW41477.1
Cysteine synthase A.
    
 0.917
SDW84280.1
Aspartate aminotransferase.
 
  
0.914
SDW49908.1
5-methyltetrahydrofolate--homocysteine methyltransferase.
     
 0.906
Bmt
5-methyltetrahydrofolate--homocysteine methyltransferase.
     
 0.906
SDW79057.1
Aspartate aminotransferase.
     
  0.900
SDX09129.1
Aromatic amino acid aminotransferase apoenzyme.
     
  0.900
SseA
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
     
  0.900
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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