STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX51672.17-alpha-hydroxysteroid dehydrogenase. (266 aa)    
Predicted Functional Partners:
SDW99948.1
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.768
PhbB
3-oxoacyl-[acyl-carrier-protein] reductase.
  
     0.729
HemF
Coproporphyrinogen oxidase.
     
 0.710
SDX51703.1
16S rRNA m(2)G 1207 methyltransferase; Belongs to the methyltransferase superfamily.
       0.692
clpS
ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
       0.684
SDW01599.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
     0.643
SDX53733.1
Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.613
SDX35909.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
 
 
 0.574
SDW10740.1
NADP-dependent 3-hydroxy acid dehydrogenase YdfG.
 
    0.546
SDX36415.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
     0.523
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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