STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX59956.1Cytochrome c556. (194 aa)    
Predicted Functional Partners:
SDX59989.1
Cytochrome c, mono-and diheme variants.
 
   
 0.978
SDX59926.1
Cytochrome c.
 
  
 0.911
SDX60087.1
Protein-disulfide isomerase.
 
     0.862
SDX60052.1
Cytochrome C oxidase, cbb3-type, subunit III.
 
   
 0.840
SDX60020.1
Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA).
 
     0.803
SDX59701.1
Protein of unknown function.
 
     0.787
SDX59835.1
Signal transduction histidine kinase.
 
     0.779
SDX59481.1
EF hand.
  
     0.754
SDX59897.1
L,D-transpeptidase catalytic domain.
 
     0.745
SDX59631.1
Cytochrome c-type biogenesis protein CcmH.
  
     0.710
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.