STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX60020.1Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA). (462 aa)    
Predicted Functional Partners:
SDX60052.1
Cytochrome C oxidase, cbb3-type, subunit III.
 
  
 0.868
SDX60087.1
Protein-disulfide isomerase.
 
   
 0.848
SDX59926.1
Cytochrome c.
 
   
 0.829
SDX59989.1
Cytochrome c, mono-and diheme variants.
 
  
 0.829
SDX59956.1
Cytochrome c556.
 
     0.803
SDX59835.1
Signal transduction histidine kinase.
 
  
 0.671
SDX59897.1
L,D-transpeptidase catalytic domain.
       0.668
SDX59250.1
Cu+-exporting ATPase.
 
  
 0.566
SDX59701.1
Protein of unknown function.
 
     0.539
SDX59481.1
EF hand.
  
 
 0.536
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.