STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX57137.1Type IV secretion system protein VirB2. (131 aa)    
Predicted Functional Partners:
SDX57209.1
Type IV secretion system protein VirB4.
 
 
 
 0.958
SDX57167.1
Type IV secretion system protein VirB3.
 
   
 0.942
SDX57308.1
Type IV secretion system protein VirB5.
 
     0.926
SDX57030.1
Hypothetical protein.
 
     0.924
SDX57382.1
Type IV secretion system protein VirB9.
 
   
 0.920
SDX57411.1
Type IV secretion system protein VirB10.
 
   
 0.915
SDX57345.1
Type IV secretion system protein VirB8.
 
   
 0.912
SDX57273.1
Transglycosylase SLT domain-containing protein.
 
   
 0.908
SDX57546.1
Type IV secretion system protein VirB6.
 
   
 0.907
SDX57104.1
Transglycosylase SLT domain-containing protein.
 
   
 0.903
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.