STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX57869.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
SDX57908.1
Protein of unknown function.
  
     0.774
SDX57800.1
Type IV secretion system T-DNA border endonuclease VirD2.
  
     0.773
SDX58035.1
Protein of unknown function.
  
     0.773
SDX58282.1
Hypothetical protein.
  
     0.771
SDX57837.1
Hypothetical protein.
  
     0.769
SDX58312.1
Hypothetical protein.
  
     0.763
SDX58098.1
Methyltransferase domain-containing protein.
  
     0.762
SDX56967.1
Helix-turn-helix domain-containing protein.
  
     0.757
SDX58352.1
Chromosome partitioning protein, ParB family.
  
     0.757
SDX57482.1
Hypothetical protein.
  
     0.755
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.