STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX58253.1Antitoxin PrlF. (108 aa)    
Predicted Functional Partners:
SDX58217.1
Toxin YhaV.
 
  
 0.991
SDX58312.1
Hypothetical protein.
 
     0.731
SDX58282.1
Hypothetical protein.
 
     0.708
SDX58035.1
Protein of unknown function.
  
     0.684
SDX58352.1
Chromosome partitioning protein, ParB family.
 
   
 0.658
SDX58731.1
Hypothetical protein.
  
     0.655
SDX58502.1
Hypothetical protein.
 
     0.649
SDX58424.1
Hypothetical protein.
 
     0.557
SDX58066.1
Hypothetical protein.
  
     0.509
SDW79963.1
Conserved repeat domain-containing protein.
  
   
 0.476
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.