STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX64210.1TRAP-type C4-dicarboxylate transport system, small permease component. (182 aa)    
Predicted Functional Partners:
SDX64236.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
  
 0.913
SDX64177.1
TRAP transporter, DctM subunit.
 
 
 0.912
SDX45610.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
  
 0.806
SDX64861.1
Hypothetical protein.
 
  
 0.740
SDX74294.1
Hypothetical protein.
 
  
 0.644
SDX45678.1
TRAP transporter, DctM subunit.
 
 
 0.618
SDW52090.1
Hypothetical protein.
  
     0.598
SDW72254.1
TRAP-type C4-dicarboxylate transport system, substrate-binding protein.
 
  
 0.445
SDW70437.1
TRAP transporter solute receptor, TAXI family.
  
     0.443
SDX64150.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
       0.429
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.