STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX64347.1acyl-CoA dehydrogenase. (443 aa)    
Predicted Functional Partners:
SDX64316.1
Enoyl-CoA hydratase.
 
 0.927
SDX64374.1
Hypothetical protein.
 
 
 0.908
SDX64407.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
 
 
 0.852
SDX64288.1
Enoyl-CoA hydratase.
 
 0.824
SDX35742.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.773
SDW17995.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.736
SDW72422.1
Short chain enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.736
SDX64261.1
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.709
SDX64431.1
Long-chain acyl-CoA synthetase.
 
    0.705
SDX49460.1
Electron transfer flavoprotein alpha subunit apoprotein.
 
 0.686
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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