STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX71790.1Cytochrome c oxidase assembly factor CtaG. (330 aa)    
Predicted Functional Partners:
SDX71762.1
Penicillin amidase.
 
     0.947
CoxB-2
Cytochrome c oxidase subunit 2.
  
  
 0.724
SDX60399.1
TniB protein.
  
     0.568
SDX20943.1
Glycosyltransferase involved in LPS biosynthesis, GR25 family.
  
     0.504
SDX60432.1
Putative transposase.
  
     0.489
SDX71729.1
Hypothetical protein.
 
     0.479
SDX11251.1
Ubiquinol-cytochrome c reductase cytochrome c1 subunit.
  
  
 0.411
CtaD
Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
  
 0.410
CtaD-2
Cytochrome c oxidase subunit I+III; Belongs to the heme-copper respiratory oxidase family.
  
  
 0.410
SDW97900.1
Cytochrome c oxidase subunit 3.
  
  
 0.402
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.