STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDX75627.1Chromosome partitioning protein. (242 aa)    
Predicted Functional Partners:
SDX75599.1
Hypothetical protein.
       0.773
SDX73120.1
Replication initiator protein A.
 
   
 0.580
SDX75567.1
Plasmid replication initiator protein.
 
   
 0.526
SDW14592.1
DNA modification methylase.
  
 
 0.501
SDX75655.1
Toxin YoeB.
     
 0.479
SDX75681.1
Antitoxin YefM; Antitoxin component of a type II toxin-antitoxin (TA) system.
       0.476
SDX29279.1
Chromosome segregation DNA-binding protein; Belongs to the ParB family.
  
 
 0.472
SDX58623.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
  
 
 0.472
SDX65984.1
Chromosome partitioning protein, ParB family; Belongs to the ParB family.
  
 
 0.472
SDW75022.1
Chromosome partitioning protein, ParB family.
  
 
 0.451
Your Current Organism:
Sulfitobacter pontiacus
NCBI taxonomy Id: 60137
Other names: DSM 10014, JCM 21789, S. pontiacus, VKM B-2022, strain ChLG 10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.