STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6NNG220S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. (423 aa)    
Predicted Functional Partners:
A0A1V6NB29
Bms1-type G domain-containing protein.
   
 0.999
A0A1V6NI04
RIO domain-containing protein.
   
 0.999
A0A1V6NPW5
Uncharacterized protein.
   
 0.999
A0A1V6NQP3
KH domain-containing protein.
   
 0.999
A0A1V6P4E8
Uncharacterized protein.
   
 0.999
A0A1V6P4Z3
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
   
 0.999
A0A1V6NS94
Ribosomal_S7 domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
 0.998
A0A1V6NSW6
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
   
 0.998
A0A1V6N8C6
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
    
  0.997
RPS0
40S ribosomal protein S0; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
   
  0.997
Your Current Organism:
Penicillium polonicum
NCBI taxonomy Id: 60169
Other names: CBS 222.28, IBT 12821, IMI 291194, MUCL 29204, NRRL 995, P. polonicum, Penicillium aurantiogriseum var. polonicum, Penicillium aurantiogriseum var. polonicum (W.Zalessky) Frisvad & Filt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.