STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6P5B7Cleavage and polyadenylation specificity factor subunit 2. (1001 aa)    
Predicted Functional Partners:
A0A1V6N654
CPSF_A domain-containing protein.
   
 0.999
A0A1V6NHW1
DUF3453 domain-containing protein.
   
 0.999
A0A1V6NST7
Uncharacterized protein.
   
0.999
A0A1V6NY92
Uncharacterized protein.
    
 0.999
A0A1V6P1L0
WD_REPEATS_REGION domain-containing protein.
    
 0.999
A0A1V6P5F8
Uncharacterized protein.
    
 0.999
A0A1V6NC62
Fip1 domain-containing protein.
    
 0.998
A0A1V6NCM8
Uncharacterized protein.
    
 0.998
A0A1V6NHU1
WD_REPEATS_REGION domain-containing protein.
    
 0.996
A0A1V6NI74
Serine/threonine-protein phosphatase; Belongs to the PPP phosphatase family.
   
 0.995
Your Current Organism:
Penicillium polonicum
NCBI taxonomy Id: 60169
Other names: CBS 222.28, IBT 12821, IMI 291194, MUCL 29204, NRRL 995, P. polonicum, Penicillium aurantiogriseum var. polonicum, Penicillium aurantiogriseum var. polonicum (W.Zalessky) Frisvad & Filt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.