STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6R597Uncharacterized protein. (343 aa)    
Predicted Functional Partners:
A0A1V6R4C6
Uncharacterized protein.
    
 0.999
A0A1V6RJ00
TAF domain-containing protein.
    
 0.999
A0A1V6QU33
Uncharacterized protein.
   
 0.997
A0A1V6QX02
Uncharacterized protein.
    
 0.994
A0A1V6QVJ6
TFIID_20kDa domain-containing protein.
   
 0.990
A0A1V6QWJ8
TAFII55_N domain-containing protein.
    
 0.990
A0A1V6QYB7
Uncharacterized protein.
    
 0.990
A0A1V6RQ03
DUF3591 domain-containing protein.
    
 0.989
A0A1V6QLN9
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
    
 
 0.985
A0A1V6QJX0
WD_REPEATS_REGION domain-containing protein.
    
 0.973
Your Current Organism:
Penicillium solitum
NCBI taxonomy Id: 60172
Other names: ATCC 9923, CBS 288.36, CBS 424.89, FRR 937, IBT 3948, IFO 7765, IMI 039810, IMI 092225, LSHB P52, MUCL 28668, MUCL 29173, NRRL 937, P. solitum
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