STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6RAP8Uncharacterized protein. (634 aa)    
Predicted Functional Partners:
A0A1V6QW04
Uncharacterized protein.
   
 0.738
A0A1V6QW33
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
 0.738
A0A1V6QUA8
Ribosomal_L16 domain-containing protein.
   
 0.594
A0A1V6RBC0
Fes1 domain-containing protein.
   
 0.594
A0A1V6RKM8
Ribosomal_L16 domain-containing protein.
   
 0.594
A0A1V6R0G5
Ribosomal_L2_C domain-containing protein.
   
 
 0.540
A0A1V6RLQ0
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
    
 
 0.515
A0A1V6QRN5
Uncharacterized protein.
    
   0.514
A0A1V6R009
Uncharacterized protein.
    
   0.514
A0A1V6R1M5
Uncharacterized protein.
    
   0.514
Your Current Organism:
Penicillium solitum
NCBI taxonomy Id: 60172
Other names: ATCC 9923, CBS 288.36, CBS 424.89, FRR 937, IBT 3948, IFO 7765, IMI 039810, IMI 092225, LSHB P52, MUCL 28668, MUCL 29173, NRRL 937, P. solitum
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