STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6X2P3Integrase catalytic domain-containing protein. (1998 aa)    
Predicted Functional Partners:
A0A1V6XZI1
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.560
A0A1V6Y4C0
WD_REPEATS_REGION domain-containing protein.
    
 0.547
A0A1V6Z1U1
Uncharacterized protein.
    
  0.533
A0A1V6XNZ4
RPA_C domain-containing protein.
    
  0.529
A0A1V6Y9Z2
ERCC4 domain-containing protein.
    
  0.529
A0A1V6Z258
Uncharacterized protein.
    
  0.487
A0A1V6XKS5
Stn1 domain-containing protein.
    
  0.478
A0A1V6YKC8
Uncharacterized protein.
    
  0.465
A0A1V6Z1S2
dUTPase domain-containing protein.
    
  0.465
A0A1V6ZAA5
Uncharacterized protein.
    
  0.465
Your Current Organism:
Penicillium nalgiovense
NCBI taxonomy Id: 60175
Other names: CBS 101030, CBS 352.48, IBT 21536, IBT 3800, IBT 3861, MUCL 31194, NRRL 911, P. nalgiovense
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