STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6XFN8Uncharacterized protein. (219 aa)    
Predicted Functional Partners:
A0A1V6X169
PKS_KS domain-containing protein.
  
 
 0.615
A0A1V6Z4R7
PKS_AT domain-containing protein.
  
 
 0.615
A0A1V6Z0V4
Uncharacterized protein.
     
 0.538
A0A1V6X8Y2
Very-long-chain 3-oxoacyl-CoA reductase; Component of the microsomal membrane bound fatty acid elongation system, which produces the 26-carbon very long-chain fatty acids (VLCFA) from palmitate. Catalyzes the reduction of the 3- ketoacyl-CoA intermediate that is formed in each cycle of fatty acid elongation. VLCFAs serve as precursors for ceramide and sphingolipids.
    
 0.530
A0A1V6Z3V1
Uncharacterized protein.
    
 0.530
A0A1V6U6K4
Uncharacterized protein.
   
 
  0.487
A0A1V6USU8
Uncharacterized protein.
   
 
  0.487
A0A1V6V3R5
Uncharacterized protein.
   
 
  0.487
A0A1V6VQG4
Uncharacterized protein.
   
 
  0.487
A0A1V6W3V7
Uncharacterized protein.
   
 
  0.487
Your Current Organism:
Penicillium nalgiovense
NCBI taxonomy Id: 60175
Other names: CBS 101030, CBS 352.48, IBT 21536, IBT 3800, IBT 3861, MUCL 31194, NRRL 911, P. nalgiovense
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