STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6XNE3BHLH domain-containing protein. (678 aa)    
Predicted Functional Partners:
A0A1V6Z4P4
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
  0.791
A0A1V6Z5K6
Uncharacterized protein.
    
  0.701
A0A1V6Z5R8
NTF2 domain-containing protein.
    
  0.701
A0A1V6ZAR3
Uncharacterized protein.
    
  0.701
A0A1V6XZ62
Uncharacterized protein.
    
 0.685
A0A1V6Y8U4
Uncharacterized protein.
  
  
  0.628
A0A1V6XUL4
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.551
A0A1V6YA96
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.551
A0A1V6YDR1
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
  0.551
A0A1V6YFN2
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
  0.551
Your Current Organism:
Penicillium nalgiovense
NCBI taxonomy Id: 60175
Other names: CBS 101030, CBS 352.48, IBT 21536, IBT 3800, IBT 3861, MUCL 31194, NRRL 911, P. nalgiovense
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