STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6XXK1HIT domain-containing protein. (189 aa)    
Predicted Functional Partners:
A0A1V6Z617
Uncharacterized protein.
    
 0.861
A0A1V6YUG4
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.795
A0A1V6YPW9
Uncharacterized protein.
    
 0.775
A0A1V6YIQ2
RING-type domain-containing protein.
    
 0.769
A0A1V6XED4
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
  0.736
A0A1V6YYB0
Uncharacterized protein.
  
  0.736
A0A1V6YQG8
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.707
A0A1V6Z3Y9
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 
  0.696
A0A1V6ZA37
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.685
A0A1V6YJM4
CYCLIN domain-containing protein; Belongs to the cyclin family.
    
  0.684
Your Current Organism:
Penicillium nalgiovense
NCBI taxonomy Id: 60175
Other names: CBS 101030, CBS 352.48, IBT 21536, IBT 3800, IBT 3861, MUCL 31194, NRRL 911, P. nalgiovense
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