A0A1V6XZL6 protein (Penicillium nalgiovense)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1V6XZL6

Oxidoreductase-like domain-containing protein. (271 aa)

Predicted Functional Partners:

A0A1V6YBH3

0.846

A0A1V6ZAR5

0.846

A0A1V6XC11

0.599

A0A1V6XD57

0.599

A0A1V6XEG5

0.599

A0A1V6XGM6

0.599

A0A1V6XGR2

0.599

A0A1V6XL41

0.599

A0A1V6XMI6

0.599

A0A1V6XXH2

0.599

Your Current Organism:

Penicillium nalgiovense

NCBI taxonomy Id: 60175
Other names: CBS 101030, CBS 352.48, IBT 21536, IBT 3800, IBT 3861, MUCL 31194, NRRL 911, P. nalgiovense

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6XC11	A0A1V6XD57	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.999
A0A1V6XC11	A0A1V6XEG5	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.948
A0A1V6XC11	A0A1V6XGM6	Uncharacterized protein; Belongs to the complex I LYR family.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.999
A0A1V6XC11	A0A1V6XGR2	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.999
A0A1V6XC11	A0A1V6XL41	Uncharacterized protein; Belongs to the complex I LYR family.	Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.	0.998
A0A1V6XC11	A0A1V6XMI6	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.846
A0A1V6XC11	A0A1V6XXH2	Uncharacterized protein; Belongs to the complex I LYR family.	NmrA domain-containing protein.	0.999
A0A1V6XC11	A0A1V6XZL6	Uncharacterized protein; Belongs to the complex I LYR family.	Oxidoreductase-like domain-containing protein.	0.599
A0A1V6XC11	A0A1V6YBH3	Uncharacterized protein; Belongs to the complex I LYR family.	Uncharacterized protein.	0.999
A0A1V6XC11	A0A1V6ZAR5	Uncharacterized protein; Belongs to the complex I LYR family.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.999
A0A1V6XD57	A0A1V6XC11	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.999
A0A1V6XD57	A0A1V6XEG5	Uncharacterized protein.	Uncharacterized protein.	0.618
A0A1V6XD57	A0A1V6XGM6	Uncharacterized protein.	Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.998
A0A1V6XD57	A0A1V6XGR2	Uncharacterized protein.	Uncharacterized protein.	0.997
A0A1V6XD57	A0A1V6XL41	Uncharacterized protein.	Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.	0.997
A0A1V6XD57	A0A1V6XMI6	Uncharacterized protein.	Uncharacterized protein.	0.742
A0A1V6XD57	A0A1V6XXH2	Uncharacterized protein.	NmrA domain-containing protein.	0.998
A0A1V6XD57	A0A1V6XZL6	Uncharacterized protein.	Oxidoreductase-like domain-containing protein.	0.599
A0A1V6XD57	A0A1V6YBH3	Uncharacterized protein.	Uncharacterized protein.	0.984
A0A1V6XD57	A0A1V6ZAR5	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.997