STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6Y7J8Plus3 domain-containing protein. (609 aa)    
Predicted Functional Partners:
A0A1V6YP66
Uncharacterized protein.
   
 0.998
A0A1V6XQJ5
Uncharacterized protein.
   
 0.996
A0A1V6YD71
CDC73_C domain-containing protein.
   
 0.996
A0A1V6YQB8
Uncharacterized protein.
   
 0.996
A0A1V6Y0M8
FACT complex subunit POB3; Component of the FACT complex, a general chromatin factor that acts to reorganize nucleosomes. The FACT complex is involved in multiple processes that require DNA as a template such as mRNA elongation, DNA replication and DNA repair. During transcription elongation the FACT complex acts as a histone chaperone that both destabilizes and restores nucleosomal structure. It facilitates the passage of RNA polymerase II and transcription by promoting the dissociation of one histone H2A-H2B dimer from the nucleosome, then subsequently promotes the reestablishment of [...]
   
 0.989
A0A1V6YHZ7
Transcription elongation factor SPT5; The SPT4-SPT5 complex mediates both activation and inhibition of transcription elongation, and plays a role in pre-mRNA processing. This complex seems to be important for the stability of the RNA polymerase II elongation machinery on the chromatin template but not for the inherent ability of this machinery to translocate down the gene.
    
 
 0.977
A0A1V6YG04
Uncharacterized protein.
   
 0.960
A0A1V6XNA9
Uncharacterized protein.
   
 0.959
A0A1V6XC28
Histone H2B; Belongs to the histone H2B family.
    
 0.956
A0A1V6Y9I9
WD_REPEATS_REGION domain-containing protein.
    
 0.956
Your Current Organism:
Penicillium nalgiovense
NCBI taxonomy Id: 60175
Other names: CBS 101030, CBS 352.48, IBT 21536, IBT 3800, IBT 3861, MUCL 31194, NRRL 911, P. nalgiovense
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.