STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6YCS0Uncharacterized protein. (325 aa)    
Predicted Functional Partners:
A0A1V6YCU3
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.997
A0A1V6ZA60
Utp12 domain-containing protein.
   
 
 0.979
A0A1V6XKH2
Uncharacterized protein.
   
 
 0.974
A0A1V6YQI3
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 
 0.967
A0A1V6XU56
Uncharacterized protein.
   
 0.957
A0A1V6Z4W2
Sas10 domain-containing protein.
   
 
 0.932
A0A1V6XZM0
Uncharacterized protein.
   
 
 0.927
A0A1V6YFV5
Kri1_C domain-containing protein.
   
 
 0.916
A0A1V6Z2J3
S4 RNA-binding domain-containing protein.
   
 0.909
A0A1V6XUF1
Uncharacterized protein.
   
 0.905
Your Current Organism:
Penicillium nalgiovense
NCBI taxonomy Id: 60175
Other names: CBS 101030, CBS 352.48, IBT 21536, IBT 3800, IBT 3861, MUCL 31194, NRRL 911, P. nalgiovense
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