STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1V6YFJ8TGc domain-containing protein. (737 aa)    
Predicted Functional Partners:
A0A1V6Y261
Uncharacterized protein.
    
 0.796
A0A1V6YU00
WD_REPEATS_REGION domain-containing protein.
   
 0.665
A0A1V6Y9Q5
Ipi1_N domain-containing protein.
   
 0.635
NOP7
Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 0.634
A0A1V6YG37
Uncharacterized protein.
 
  
  0.596
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.527
A0A1V6Z9Z4
RNA helicase.
   
   0.523
A0A1V6Y2W9
Uncharacterized protein; Belongs to the universal ribosomal protein uS11 family.
    
  0.517
A0A1V6Z588
CP-type G domain-containing protein.
   
  0.502
A0A1V6Z6T0
CLP1_P domain-containing protein.
   
  0.502
Your Current Organism:
Penicillium nalgiovense
NCBI taxonomy Id: 60175
Other names: CBS 101030, CBS 352.48, IBT 21536, IBT 3800, IBT 3861, MUCL 31194, NRRL 911, P. nalgiovense
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