A0A1V6Z9E8 protein (Penicillium nalgiovense)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

A0A1V6Z9E8

Uncharacterized protein. (191 aa)

Predicted Functional Partners:

A0A1V6XRT3

0.710

A0A1V6Z2K0

0.681

A0A1V6XKT5

0.605

A0A1V6Z5L2

0.570

A0A1V6Z6Y1

0.570

A0A1V6YXH4

0.564

A0A1V6ZAY5

0.502

A0A1V6Z548

0.495

A0A1V6YQV7

0.483

A0A1V6YSU7

0.483

Your Current Organism:

Penicillium nalgiovense

NCBI taxonomy Id: 60175
Other names: CBS 101030, CBS 352.48, IBT 21536, IBT 3800, IBT 3861, MUCL 31194, NRRL 911, P. nalgiovense

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A1V6XKT5	A0A1V6XRT3	Ribosomal_L30 domain-containing protein.	Uncharacterized protein.	0.709
A0A1V6XKT5	A0A1V6YXH4	Ribosomal_L30 domain-containing protein.	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	0.646
A0A1V6XKT5	A0A1V6Z2K0	Ribosomal_L30 domain-containing protein.	zf-Tim10_DDP domain-containing protein.	0.441
A0A1V6XKT5	A0A1V6Z9E8	Ribosomal_L30 domain-containing protein.	Uncharacterized protein.	0.605
A0A1V6XKT5	A0A1V6ZAY5	Ribosomal_L30 domain-containing protein.	MRP-S28 domain-containing protein.	0.970
A0A1V6XRT3	A0A1V6XKT5	Uncharacterized protein.	Ribosomal_L30 domain-containing protein.	0.709
A0A1V6XRT3	A0A1V6Z5L2	Uncharacterized protein.	Uncharacterized protein.	0.416
A0A1V6XRT3	A0A1V6Z6Y1	Uncharacterized protein.	Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.	0.416
A0A1V6XRT3	A0A1V6Z9E8	Uncharacterized protein.	Uncharacterized protein.	0.710
A0A1V6YQV7	A0A1V6Z548	NLPC_P60 domain-containing protein.	Proteasome subunit alpha type.	0.993
A0A1V6YQV7	A0A1V6Z5L2	NLPC_P60 domain-containing protein.	Uncharacterized protein.	0.553
A0A1V6YQV7	A0A1V6Z6Y1	NLPC_P60 domain-containing protein.	Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.	0.553
A0A1V6YQV7	A0A1V6Z9E8	NLPC_P60 domain-containing protein.	Uncharacterized protein.	0.483
A0A1V6YSU7	A0A1V6Z548	MPN domain-containing protein.	Proteasome subunit alpha type.	0.994
A0A1V6YSU7	A0A1V6Z5L2	MPN domain-containing protein.	Uncharacterized protein.	0.556
A0A1V6YSU7	A0A1V6Z6Y1	MPN domain-containing protein.	Prefoldin subunit 3; Binds specifically to cytosolic chaperonin (c-CPN) and transfers target proteins to it. Binds to nascent polypeptide chain and promotes folding in an environment in which there are many competing pathways for nonnative proteins; Belongs to the prefoldin subunit alpha family.	0.559
A0A1V6YSU7	A0A1V6Z9E8	MPN domain-containing protein.	Uncharacterized protein.	0.483
A0A1V6YXH4	A0A1V6XKT5	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	Ribosomal_L30 domain-containing protein.	0.646
A0A1V6YXH4	A0A1V6Z9E8	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.	Uncharacterized protein.	0.564
A0A1V6Z2K0	A0A1V6XKT5	zf-Tim10_DDP domain-containing protein.	Ribosomal_L30 domain-containing protein.	0.441