STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A1R3REB8Copper-fist domain-containing protein. (220 aa)    
Predicted Functional Partners:
A0A1R3RVV5
WD_REPEATS_REGION domain-containing protein.
   
 0.677
A0A1R3RG23
Ipi1_N domain-containing protein.
   
 0.639
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
  0.562
A0A1R3RKA8
Uncharacterized protein.
    
  0.541
A0A1R3RUV5
Uncharacterized protein; Belongs to the calmodulin family.
    
  0.541
A0A1R3RNC1
CLP1_P domain-containing protein.
   
  0.526
A0A1R3RJF9
MHYT domain-containing protein.
    
  0.515
A0A1R3R5X5
Uncharacterized protein.
    
  0.509
A0A1R3RCN2
CRIB domain-containing protein.
    
  0.506
A0A1R3RE92
Uncharacterized protein.
    
  0.506
Your Current Organism:
Aspergillus carbonarius
NCBI taxonomy Id: 602072
Other names: A. carbonarius ITEM 5010, Aspergillus carbonarius ITEM 5010
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